› 5fzx

Solution NMR

High resolution solution NMR structure of the spider venom peptide U5- scytotoxin-Sth1a

Released:
DOI: 10.2210/pdb5fzx/pdb
PDB entry 5fzx coloured by chain, ensemble of 20 models, front view.
PDB entry 5fzx coloured by chain, ensemble of 20 models, side view.
PDB entry 5fzx coloured by chain, ensemble of 20 models, top view.
Source organism: Scytodes thoracica
Primary publication:
Characterization of Three Venom Peptides from the Spitting Spider Scytodes thoracica.
Ariki NK, Muñoz LE, Armitage EL, Goodstein FR, George KG, Smith VL, Vetter I, Herzig V, King GF, Loening NM
PLoS One 11 e0156291 (2016)
PMID: 27227898

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-100791 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
U5-scytotoxin-Sth1a Chain: A
Molecule details ›
Chain: A
Length: 36 amino acids
Theoretical weight: 3.92 KDa
Source organism: Scytodes thoracica
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A0A0A0V633 (Residues: 36-71; Coverage: 71%)

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 59%
Refinement method: CNS
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

1 review citation

Venom and Social Behavior: The Potential of Using Spiders to Evaluate the Evolution of Sociality under High Risk.
Gatchoff et al. (2021)

2 mentions without citation

Bottom-Up Proteomic Analysis of Polypeptide Venom Components of the Giant Ant Dinoponera Quadriceps.
Ceolin Mariano et al. (2019)
1 more