› 5hlj

X-ray diffraction
2.41Å resolution

Crystal Structure of Major Envelope Protein VP24 from White Spot Syndrome Virus

Released:
DOI: 10.2210/pdb5hlj/pdb
PDB entry 5hlj coloured by chain, front view.
PDB entry 5hlj coloured by chain, side view.
PDB entry 5hlj coloured by chain, top view.
Source organism: White spot syndrome virus
Primary publication:
Crystal Structure of Major Envelope Protein VP24 from White Spot Syndrome Virus.
Sun L, Su Y, Zhao Y, Fu ZQ, Wu Y
Sci Rep 6 32309 (2016)
PMID: 27572278

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-182340 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
White spot syndrome virus structural envelope protein Vp28 domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 188 amino acids
Theoretical weight: 21.26 KDa
Source organism: White spot syndrome virus
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q80BF2 (Residues: 30-208; Coverage: 86%)
Sequence domains: White spot syndrome virus structural envelope protein VP

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U
Spacegroup: I213
Unit cell:
a: 139.735Å b: 139.735Å c: 139.735Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.173 0.171 0.193
Expression system: Escherichia coli BL21(DE3)

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Citations

2 review citations

Silver Nanoparticles as Potential Antiviral Agents.
Ratan et al. (2021)
1 more

1 mention without citation

Crystal Structure of Major Envelope Protein VP24 from White Spot Syndrome Virus.
Sun et al. (2016)