› 5icq

X-ray diffraction
1.9Å resolution

Methanobactin periplasmic binding protein

Released:
DOI: 10.2210/pdb5icq/pdb
PDB entry 5icq coloured by chain, front view.
PDB entry 5icq coloured by chain, side view.
PDB entry 5icq coloured by chain, top view.
Source organism: Methylocystis parvus OBBP
Primary publication:
Methanobactin transport machinery.
Dassama LM, Kenney GE, Ro SY, Zielazinski EL, Rosenzweig AC
Proc Natl Acad Sci U S A 113 13027-13032 (2016)
PMID: 27807137

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-103524 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Solute-binding protein family 5 domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 610 amino acids
Theoretical weight: 68.15 KDa
Source organism: Methylocystis parvus OBBP
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: A0A1L1QK06 (Residues: 1-588; Coverage: 100%)
Sequence domains: Bacterial extracellular solute-binding proteins, family 5 Middle
Structure domains:

Ligands and Environments

1 bound ligand:
Ligand SO4 5 x SO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 23-ID-B
Spacegroup: C2221
Unit cell:
a: 122.2Å b: 141.5Å c: 83.1Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.158 0.156 0.194
Expression system: Escherichia coli BL21

Quick links

Citations

11 review citations

Bifunctional antimicrobial conjugates and hybrid antimicrobials.
Klahn et al. (2017)
10 more

3 mentions without citation

Cu Homeostasis in Bacteria: The Ins and Outs.
Andrei et al. (2020)
2 more