› 5iye

X-ray diffraction
1.69Å resolution

Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 resolution

Released:
DOI: 10.2210/pdb5iye/pdb
PDB entry 5iye coloured by chain, front view.
PDB entry 5iye coloured by chain, side view.
PDB entry 5iye coloured by chain, top view.
Source organism: synthetic construct
Primary publication:
Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 Å resolution.
Karthik S, Thirugnanasambandam A, Mandal PK, Gautham N
Nucleosides Nucleotides Nucleic Acids 36 343-354 (2017)
PMID: 28387634

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-118823 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
DNA (5'-D(*CP*CP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*GP*G)-3') Chains: A, B
Molecule details ›
Chains: A, B
Length: 14 nucleotides
Theoretical weight: 4.28 KDa
Source organism: synthetic construct
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand ZN 2 x ZN
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE BM14
Spacegroup: P41
Unit cell:
a: 29.283Å b: 29.283Å c: 88.213Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.191 0.188 0.22
Expression system: Not provided

Quick links

Citations

1 review citation

Systematics for types and effects of DNA variations.
Vihinen M. (2018)