› 5iyg

X-ray diffraction
1.7Å resolution

Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 resolution

Released:
DOI: 10.2210/pdb5iyg/pdb
PDB entry 5iyg coloured by chain, front view.
PDB entry 5iyg coloured by chain, side view.
PDB entry 5iyg coloured by chain, top view.
Source organism: synthetic construct
Primary publication:
Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 Å resolution.
Karthik S, Thirugnanasambandam A, Mandal PK, Gautham N
Nucleosides Nucleotides Nucleic Acids 36 343-354 (2017)
PMID: 28387634

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-118824 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
DNA (5'-D(*CP*CP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*GP*G)-3') Chains: A, B
Molecule details ›
Chains: A, B
Length: 14 nucleotides
Theoretical weight: 4.28 KDa
Source organism: synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE BM14
Spacegroup: P41212
Unit cell:
a: 41.463Å b: 41.463Å c: 88.724Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.218 0.214 0.251
Expression system: Not provided

Quick links

Citations

1 mention without citation

Systematics for types and effects of DNA variations.
Vihinen M. (2018)