› 5kgo

X-ray diffraction
2.9Å resolution

Structure of K. pneumonia MrkH-c-di-GMP complex

Released:
DOI: 10.2210/pdb5kgo/pdb
PDB entry 5kgo coloured by chain, front view.
PDB entry 5kgo coloured by chain, side view.
PDB entry 5kgo coloured by chain, top view.
Source organism: Klebsiella pneumoniae
Entry author: Schumacher M

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-124331 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Type 3 fimbriae transcription activator Chains: A, D
Molecule details ›
Chains: A, D
Length: 235 amino acids
Theoretical weight: 27.46 KDa
Source organism: Klebsiella pneumoniae
Expression system: Escherichia coli
UniProt:
  • Canonical: G3FT00 (Residues: 1-232; Coverage: 99%)
Gene names: B5L96_03720, B6I68_10070, BL124_00031880, DW281_12555, EAO17_08985, FXN67_05225, G4V31_12045, GJJ08_004650, GJJ13_004230, GJJ18_17510, NCTC11679_00943, NCTC13443_06213, QIG75_01940, SAMEA3499874_00921, SAMEA3499901_01708, SAMEA3512100_02358, SAMEA3515122_02218, SAMEA3538658_00150, SAMEA3538828_01683, SAMEA3673026_00928, SAMEA4364603_00964, SAMEA4370542_01100, SAMEA4873632_03258, VKR_00878, mrkH
Structure domains: predicted glycosyltransferase like domains

Ligands and Environments

1 bound ligand:
Ligand C2E 4 x C2E
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 8.3.1
Spacegroup: P212121
Unit cell:
a: 65.573Å b: 74.569Å c: 135.538Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.232 0.226 0.289
Expression system: Escherichia coli

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