5o9v

X-ray diffraction
2.2Å resolution

HsNMT1 in complex with CoA and Myristoylated-GGCFSKPK octapeptide

Released:

Function and Biology Details

Reaction catalysed:
Tetradecanoyl-CoA + an N-terminal-glycyl-[protein] = CoA + an N-terminal-N-tetradecanoylglycyl-[protein]
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-151736 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Glycylpeptide N-tetradecanoyltransferase 1 Chains: A, B
Molecule details ›
Chains: A, B
Length: 402 amino acids
Theoretical weight: 46.47 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P30419 (Residues: 99-496; Coverage: 80%)
Gene names: NMT, NMT1
Sequence domains:
Structure domains: Aminopeptidase
Apoptosis-inducing factor 3 Chains: C, D
Molecule details ›
Chains: C, D
Length: 8 amino acids
Theoretical weight: 825 Da
Source organism: Homo sapiens
Expression system: Not provided
UniProt:
  • Canonical: Q96NN9 (Residues: 2-9; Coverage: 1%)
Gene names: AIFL, AIFM3

Ligands and Environments


Cofactor: Ligand COA 2 x COA
3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE BM14
Unit cell:
a: 58.13Å b: 79.01Å c: 178.255Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.167 0.165 0.206
Expression systems:
  • Escherichia coli BL21(DE3)
  • Not provided