› 5ods

X-ray diffraction
3.09Å resolution

Structure of a phosphoprotein-protein complex

Released:
DOI: 10.2210/pdb5ods/pdb
PDB entry 5ods coloured by chain, front view.
PDB entry 5ods coloured by chain, side view.
PDB entry 5ods coloured by chain, top view.
Source organisms:
Primary publication:
Structure of a phosphoprotein-protein complex
Mukherjee M, Bayliss R
EMBO J. (2018)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-179340 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Clathrin heavy chain 1 Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 574 amino acids
Theoretical weight: 64.36 KDa
Source organism: Mus musculus
Expression system: Escherichia coli
UniProt:
  • Canonical: Q68FD5 (Residues: 1-574; Coverage: 34%)
Gene name: Cltc
Sequence domains:
Transforming acidic coiled-coil-containing protein 3 Chains: E, F, G, H
Molecule details ›
Chains: E, F, G, H
Length: 18 amino acids
Theoretical weight: 2.23 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9Y6A5 (Residues: 550-567; Coverage: 2%)
Gene names: ERIC1, TACC3

Ligands and Environments

No bound ligands
1 modified residue:
Ligand SEP 4 x SEP

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I03
Spacegroup: P21
Unit cell:
a: 115.52Å b: 120.04Å c: 123.13Å
α: 90° β: 95.72° γ: 90°
R-values:
R R work R free
0.223 0.221 0.269
Expression system: Escherichia coli

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