› 5vbf

X-ray diffraction
2.35Å resolution

Crystal structure of succinate semialdehyde dehydrogenase from Burkholderia vietnamiensis

Released:
DOI: 10.2210/pdb5vbf/pdb
PDB entry 5vbf coloured by chain, front view.
PDB entry 5vbf coloured by chain, side view.
PDB entry 5vbf coloured by chain, top view.
Source organism: Burkholderia vietnamiensis
Entry author: Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Function and Biology Details

Reaction catalysed: 
Succinate semialdehyde + NAD(P)(+) + H(2)O = succinate + NAD(P)H
Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107375 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Aldehyde dehydrogenase domain-containing protein Chains: A, B, C, D, E, F, G, H
Molecule details ›
Chains: A, B, C, D, E, F, G, H
Length: 478 amino acids
Theoretical weight: 51.37 KDa
Source organism: Burkholderia vietnamiensis
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A4JQH6 (Residues: 6-483; Coverage: 99%)
Gene name: Bcep1808_5591
Sequence domains: Aldehyde dehydrogenase family
Structure domains:

Ligands and Environments

4 bound ligands:
Ligand MES 8 x MES
Ligand GOL 8 x GOL
Ligand FMT 4 x FMT
Ligand UNX 8 x UNX
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 21-ID-F
Spacegroup: P212121
Unit cell:
a: 106.62Å b: 191.76Å c: 219.8Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.148 0.147 0.196
Expression system: Escherichia coli BL21(DE3)

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