› 5vc1

X-ray diffraction
1.94Å resolution

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-146858 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (2 distinct):
L-selectin Chain: A
Molecule details ›
Chain: A
Length: 157 amino acids
Theoretical weight: 18.41 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
UniProt:
  • Canonical: P14151 (Residues: 39-195; Coverage: 46%)
Gene names: LNHR, LYAM1, SELL
Sequence domains:
Structure domains:

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, MAN, BMA
Carbohydrate polymer
4 bound ligands:
Ligand PG4 1 x PG4
Ligand PEG 1 x PEG
Ligand GOL 1 x GOL
Ligand CA 1 x CA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: BESSY BEAMLINE 14.1
Spacegroup: I23
Unit cell:
a: 118.598Å b: 118.598Å c: 118.598Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.203 0.202 0.231
Expression system: Homo sapiens

Quick links

Citations

1 review citation

A head-to-tail view of L-selectin and its impact on neutrophil behaviour.
Ivetic A. (2018)
2 other articles

2 mentions without citation

Anti-Inflammatory Potential of Fucoidan for Atherosclerosis: In Silico and In Vitro Studies in THP-1 Cells.
Huwait et al. (2022)
1 more