PDB 5vn3 structure summary ‹ Protein Data Bank in Europe (PDBe)

Function and Biology Details

Biochemical function:

structural molecule activity

Biological process:

cell adhesion

Cellular component:

viral envelope

Sequence domains:

5 more domains

Structure analysis Details

Assembly composition:

hetero pentadecamer (preferred)

PDBe Complex ID:

PDB-CPX-207657 (preferred)

Entry contents:

5 distinct polypeptide molecules

Macromolecules (10 distinct):

17b Fab light chain Chains: L, N, O

Molecule details ›

Chains: L, N, O
Length: 214 amino acids
Theoretical weight: 23.43 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

Structure domains: Immunoglobulins

Transmembrane protein gp41 Chains: A, B, D

Molecule details ›

Chains: A, B, D
Length: 153 amino acids
Theoretical weight: 17.36 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Homo sapiens
UniProt:

Canonical: B3UEZ6 (Residues: 516-668; Coverage: 18%)

Gene name: env
Sequence domains: Retroviral envelope protein

Envelope glycoprotein gp160 Chains: G, I, J

Molecule details ›

Chains: G, I, J
Length: 516 amino acids
Theoretical weight: 57.7 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Homo sapiens
UniProt:

Canonical: B3UES2 (Residues: 29-509; Coverage: 56%)

Gene name: env
Sequence domains: Envelope glycoprotein GP120
Structure domains: Human immunodeficiency virus 1, Gp160, envelope glycoprotein

T-cell surface glycoprotein CD4 Chains: C, E, F

Molecule details ›

Chains: C, E, F
Length: 185 amino acids
Theoretical weight: 20.5 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
UniProt:

Canonical: P01730 (Residues: 26-208; Coverage: 42%)

Gene name: CD4
Sequence domains:

Structure domains: Immunoglobulins

17b Fab heavy chain Chains: H, K, M

Molecule details ›

Chains: H, K, M
Length: 229 amino acids
Theoretical weight: 24.48 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens