5wai

X-ray diffraction
2.9Å resolution

Crystal Structure of a Suz12-Rbbp4-Jarid2-Aebp2 Heterotetrameric Complex

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
PDBe Complex ID:
PDB-CPX-170744 (preferred)
Entry contents:
4 distinct polypeptide molecules
Macromolecules (4 distinct):
Histone-binding protein RBBP4 Chains: A, E
Molecule details ›
Chains: A, E
Length: 439 amino acids
Theoretical weight: 49.37 KDa
Source organism: Homo sapiens
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q09028 (Residues: 1-425; Coverage: 100%)
Gene names: RBAP48, RBBP4
Sequence domains:
Structure domains: YVTN repeat-like/Quinoprotein amine dehydrogenase
Polycomb protein SUZ12 Chains: B, F
Molecule details ›
Chains: B, F
Length: 478 amino acids
Theoretical weight: 55.69 KDa
Source organism: Homo sapiens
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q15022 (Residues: 76-545; Coverage: 64%)
Gene names: CHET9, JJAZ1, KIAA0160, SUZ12
Zinc finger protein AEBP2 Chains: C, G
Molecule details ›
Chains: C, G
Length: 100 amino acids
Theoretical weight: 11.59 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q6ZN18 (Residues: 407-503; Coverage: 19%)
Gene name: AEBP2
Protein Jumonji Chains: D, H
Molecule details ›
Chains: D, H
Length: 19 amino acids
Theoretical weight: 2.26 KDa
Source organism: Neogale vison
Expression system: Not provided
UniProt:
  • Canonical: Q92833 (Residues: 147-165; Coverage: 2%)
Gene names: JARID2, JMJ

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL12-2
Spacegroup: P212121
Unit cell:
a: 95.3Å b: 111.428Å c: 253.254Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.173 0.171 0.216
Expression systems:
  • Spodoptera frugiperda
  • Escherichia coli
  • Not provided