5x6d

X-ray diffraction
2.94Å resolution

Crystal structure of PrfA-DNA binary complex

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
PDBe Complex ID:
PDB-CPX-119377 (preferred)
Entry contents:
1 distinct polypeptide molecule
2 distinct DNA molecules
Macromolecules (3 distinct):
Listeriolysin regulatory protein Chains: A, B, G, H, M, N
Molecule details ›
Chains: A, B, G, H, M, N
Length: 237 amino acids
Theoretical weight: 27.33 KDa
Source organism: Listeria monocytogenes
Expression system: Escherichia coli
UniProt:
  • Canonical: P22262 (Residues: 1-237; Coverage: 100%)
Gene names: lmo0200, prfA
Structure domains:
DNA (29-MER) Chains: C, K, P
Molecule details ›
Chains: C, K, P
Length: 29 nucleotides
Theoretical weight: 8.97 KDa
Source organism: Listeria monocytogenes
Expression system: Not provided
DNA (28-MER) Chains: D, L, O
Molecule details ›
Chains: D, L, O
Length: 29 nucleotides
Theoretical weight: 8.85 KDa
Source organism: Listeria monocytogenes
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 24-ID-E
Spacegroup: P212121
Unit cell:
a: 64.82Å b: 96.443Å c: 371.911Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.216 0.213 0.266
Expression systems:
  • Escherichia coli
  • Not provided