› 5yd6

X-ray diffraction
2.34Å resolution

Crystal structure of PG-bound Nurr1-LBD

Released:
DOI: 10.2210/pdb5yd6/pdb
PDB entry 5yd6 coloured by chain, front view.
PDB entry 5yd6 coloured by chain, side view.
PDB entry 5yd6 coloured by chain, top view.
Source organism: Homo sapiens
Entry authors: Sreekanth R, Yoon HS

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-155039 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Nuclear receptor subfamily 4 group A member 2 Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 271 amino acids
Theoretical weight: 30.58 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P43354 (Residues: 328-598; Coverage: 45%)
Gene names: NOT, NR4A2, NURR1, TINUR
Sequence domains: Ligand-binding domain of nuclear hormone receptor
Structure domains: Retinoid X Receptor

Ligands and Environments

2 bound ligands:
Ligand 8SU 4 x 8SU
Ligand MG 2 x MG
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSRRC BEAMLINE BL13B1
Spacegroup: P212121
Unit cell:
a: 85.95Å b: 94.08Å c: 135.65Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.227 0.225 0.269
Expression system: Escherichia coli

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