› 5zlq

X-ray diffraction
2Å resolution

Crystal Structure of C1orf123

Released:
DOI: 10.2210/pdb5zlq/pdb
PDB entry 5zlq coloured by chain, front view.
PDB entry 5zlq coloured by chain, side view.
PDB entry 5zlq coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Identification of a novel zinc-binding protein, C1orf123, as an interactor with a heavy metal-associated domain.
Furukawa Y, Lim C, Tosha T, Yoshida K, Hagai T, Akiyama S, Watanabe S, Nakagome K, Shiro Y
PLoS One 13 e0204355 (2018)
PMID: 30260988

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-192663 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
CXXC motif containing zinc binding protein Chain: A
Molecule details ›
Chain: A
Length: 162 amino acids
Theoretical weight: 18.22 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q9NWV4 (Residues: 1-160; Coverage: 100%)
Gene names: C1orf123, CZIB
Sequence domains: CXXC motif containing zinc binding protein, eukaryotic

Ligands and Environments

1 bound ligand:
Ligand ZN 1 x ZN
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL26B2
Spacegroup: I23
Unit cell:
a: 118.131Å b: 118.131Å c: 118.131Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.183 0.18 0.233
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

5 citation in other articles

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome.
Barandun et al. (2019)
4 more

3 mentions without citation

Identification of a novel zinc-binding protein, C1orf123, as an interactor with a heavy metal-associated domain.
Furukawa et al. (2018)
2 more