6axf

X-ray diffraction
3.1Å resolution

Structure of RasGRP2 in complex with Rap1B

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-158237 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
RAS guanyl-releasing protein 2 Chains: A, C, E, G, I, K, M, O
Molecule details ›
Chains: A, C, E, G, I, K, M, O
Length: 397 amino acids
Theoretical weight: 45.88 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q7LDG7 (Residues: 1-394; Coverage: 65%)
Gene names: CDC25L, MCG7, RASGRP2
Sequence domains:
Ras-related protein Rap-1b Chains: B, D, F, H, J, L, N, P
Molecule details ›
Chains: B, D, F, H, J, L, N, P
Length: 169 amino acids
Theoretical weight: 19.15 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P61224 (Residues: 1-167; Coverage: 91%)
Gene names: OK/SW-cl.11, RAP1B
Sequence domains: Ras family
Structure domains: P-loop containing nucleotide triphosphate hydrolases

Ligands and Environments

No bound ligands
1 modified residue:

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 8.2.1
Spacegroup: I212121
Unit cell:
a: 138.998Å b: 209.258Å c: 336.765Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.205 0.202 0.258
Expression system: Escherichia coli