6f1c

X-ray diffraction
4.2Å resolution

C1rC1s complex

Released:

Function and Biology Details

Reactions catalysed:
Selective cleavage of Lys(or Arg)-|-Ile bond in complement subcomponent C1s to form C1s (EC 3.4.21.42).
Cleavage of Arg-|-Ala bond in complement component C4 to form C4a and C4b, and Lys(or Arg)-|-Lys bond in complement component C2 to form C2a and C2b: the 'classical' pathway C3 convertase.
Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
PDBe Complex ID:
PDB-CPX-133186 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (5 distinct):
Complement C1r subcomponent heavy chain Chains: A, C
Molecule details ›
Chains: A, C
Length: 291 amino acids
Theoretical weight: 33.12 KDa
Source organism: Homo sapiens
Expression system: Cricetulus griseus
UniProt:
  • Canonical: P00736 (Residues: 18-308; Coverage: 42%)
Gene name: C1R
Sequence domains:
Complement C1s subcomponent heavy chain Chains: B, D
Molecule details ›
Chains: B, D
Length: 277 amino acids
Theoretical weight: 31.24 KDa
Source organism: Homo sapiens
Expression system: Cricetulus griseus
UniProt:
  • Canonical: P09871 (Residues: 16-292; Coverage: 41%)
Gene name: C1S
Sequence domains:

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, BMA, MAN, GAL
Carbohydrate polymer : NEW Components: NAG, BMA, MAN
Carbohydrate polymer : NEW Components: NAG, BMA
3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I04-1
Spacegroup: P212121
Unit cell:
a: 96.779Å b: 124.265Å c: 195.499Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.25 0.247 0.305
Expression system: Cricetulus griseus