6gzs

X-ray diffraction
1.9Å resolution

Structure of Chlamydia trachomatis effector protein ChlaDUB1 bound to ubiquitin

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-109108 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Deubiquitinase and deneddylase Dub1 Chain: A
Molecule details ›
Chain: A
Length: 273 amino acids
Theoretical weight: 31.31 KDa
Source organism: Chlamydia trachomatis L2/434/Bu
Expression system: Escherichia coli
UniProt:
  • Canonical: B0B9A0 (Residues: 130-401; Coverage: 68%)
Gene names: CTL0247, cdu1
Sequence domains: Ulp1 protease family, C-terminal catalytic domain
Ubiquitin Chain: B
Molecule details ›
Chain: B
Length: 75 amino acids
Theoretical weight: 8.52 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P0CG47 (Residues: 153-227; Coverage: 33%)
Gene name: UBB
Sequence domains: Ubiquitin family

Ligands and Environments

3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I03
Spacegroup: P21
Unit cell:
a: 53.798Å b: 55.768Å c: 58.574Å
α: 90° β: 93.57° γ: 90°
R-values:
R R work R free
0.183 0.181 0.213
Expression system: Escherichia coli