6e8z

X-ray diffraction
2.1Å resolution

Binary complex of Human glycerol 3-phosphate dehydrogenase with NAD

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
homo dimer (preferred)
PDBe Complex ID:
PDB-CPX-149368 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic Chains: A, B
Molecule details ›
Chains: A, B
Length: 349 amino acids
Theoretical weight: 37.61 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P21695 (Residues: 1-349; Coverage: 100%)
Gene name: GPD1
Sequence domains:
Structure domains:

Ligands and Environments


Cofactor: Ligand NAD 2 x NAD
3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL12-2
Spacegroup: P21
Unit cell:
a: 63.58Å b: 78.78Å c: 69.179Å
α: 90° β: 104.32° γ: 90°
R-values:
R R work R free
0.172 0.169 0.225
Expression system: Escherichia coli