6et5

Electron Microscopy
3Å resolution

Reaction centre light harvesting complex 1 from Blc. virids

Released:
Source organism: Blastochloris viridis
Related structures: EMD-3951

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero 54-mer (preferred)
PDBe Complex ID:
PDB-CPX-137413 (preferred)
Entry contents:
7 distinct polypeptide molecules
Macromolecules (7 distinct):
Photosynthetic reaction center cytochrome c subunit Chain: C
Molecule details ›
Chain: C
Length: 333 amino acids
Theoretical weight: 37.18 KDa
Source organism: Blastochloris viridis
UniProt:
  • Canonical: P07173 (Residues: 21-353; Coverage: 99%)
Gene names: BVIRIDIS_00500, cytC, pufC
Sequence domains: Photosynthetic reaction centre cytochrome C subunit
Structure domains: Photosynthetic Reaction Center, subunit C, domain 2
Reaction center protein L chain Chain: L
Molecule details ›
Chain: L
Length: 274 amino acids
Theoretical weight: 30.6 KDa
Source organism: Blastochloris viridis
UniProt:
  • Canonical: P06009 (Residues: 1-274; Coverage: 100%)
Gene name: pufL
Sequence domains: Photosynthetic reaction centre protein
Structure domains: Photosystem II protein D1-like
Reaction center protein M chain Chain: M
Molecule details ›
Chain: M
Length: 323 amino acids
Theoretical weight: 35.93 KDa
Source organism: Blastochloris viridis
UniProt:
  • Canonical: P06010 (Residues: 2-324; Coverage: 100%)
Gene name: pufM
Sequence domains: Photosynthetic reaction centre protein
Structure domains: Photosystem II protein D1-like
Reaction center protein H chain Chain: H
Molecule details ›
Chain: H
Length: 258 amino acids
Theoretical weight: 28.56 KDa
Source organism: Blastochloris viridis
UniProt:
  • Canonical: P06008 (Residues: 1-258; Coverage: 100%)
Gene name: puhA
Sequence domains:
Structure domains:
Light-harvesting protein B-1015 alpha chain Chains: 3, 6, F, K, P, S, V, Y, b, e, h, k, n, q, t, w, z
Molecule details ›
Chains: 3, 6, F, K, P, S, V, Y, b, e, h, k, n, q, t, w, z
Length: 59 amino acids
Theoretical weight: 6.98 KDa
Source organism: Blastochloris viridis
UniProt:
  • Canonical: P04123 (Residues: 1-59; Coverage: 86%)
Gene name: pufA
Sequence domains: Antenna complex alpha/beta subunit
Structure domains: Light-harvesting complex
Light-harvesting protein B-1015 beta chain Chains: 1, 4, 7, G, N, Q, T, W, Z, c, f, i, l, o, r, u, x
Molecule details ›
Chains: 1, 4, 7, G, N, Q, T, W, Z, c, f, i, l, o, r, u, x
Length: 56 amino acids
Theoretical weight: 6.27 KDa
Source organism: Blastochloris viridis
UniProt:
  • Canonical: P04124 (Residues: 1-56; Coverage: 81%)
Gene name: pufB
Sequence domains: Antenna complex alpha/beta subunit
Light-harvesting protein B-1015 gamma chain Chains: 2, 5, I, O, R, U, X, a, d, g, j, m, p, s, v, y
Molecule details ›
Chains: 2, 5, I, O, R, U, X, a, d, g, j, m, p, s, v, y
Length: 24 amino acids
Theoretical weight: 2.8 KDa
Source organism: Blastochloris viridis
UniProt:
  • Canonical: P04126 (Residues: 13-36; Coverage: 67%)

Ligands and Environments

Experiments and Validation Details

Entry percentile scores
Resolution:
Relevant EMDB volumes: EMD-3951