6g11

X-ray diffraction
1.9Å resolution

Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikE with the HMA domain of Pikp-1 from rice (Oryza sativa)

Released:

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-111285 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
AVR-Pik protein Chains: C, F
Molecule details ›
Chains: C, F
Length: 93 amino acids
Theoretical weight: 10.8 KDa
Source organism: Pyricularia oryzae
Expression system: Escherichia coli DH1
UniProt:
  • Canonical: C4B8C2 (Residues: 22-113; Coverage: 100%)
Gene name: AVR-Pik
HMA domain-containing protein Chains: A, B, D, E
Molecule details ›
Chains: A, B, D, E
Length: 80 amino acids
Theoretical weight: 8.37 KDa
Source organism: Oryza sativa Japonica Group
Expression system: Escherichia coli DH1
UniProt:
  • Canonical: E9KPB5 (Residues: 186-263; Coverage: 7%)
Gene name: Pikp-1
Structure domains: Alpha-Beta Plaits

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I03
Spacegroup: P212121
Unit cell:
a: 67.196Å b: 80.177Å c: 105.627Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.21 0.209 0.224
Expression system: Escherichia coli DH1