6gvw

X-ray diffraction
3.75Å resolution

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero decamer (preferred)
PDBe Complex ID:
PDB-CPX-155508 (preferred)
Entry contents:
5 distinct polypeptide molecules
Macromolecules (5 distinct):
BRCA1-A complex subunit Abraxas 1 Chains: A, F
Molecule details ›
Chains: A, F
Length: 411 amino acids
Theoretical weight: 46.43 KDa
Source organism: Mus musculus
Expression system: Trichoplusia ni
UniProt:
  • Canonical: Q8BPZ8 (Residues: 1-407; Coverage: 100%)
Gene names: Abra1, Abraxas1, Ccdc98, Fam175a
Sequence domains: BRCA1-A complex subunit Abraxas 1 MPN domain
Lys-63-specific deubiquitinase BRCC36 Chains: B, G
Molecule details ›
Chains: B, G
Length: 295 amino acids
Theoretical weight: 33.71 KDa
Source organism: Mus musculus
Expression system: Trichoplusia ni
UniProt:
  • Canonical: P46737 (Residues: 1-291; Coverage: 100%)
Gene names: Brcc3, Brcc36, C6.1a
Sequence domains:
BRISC and BRCA1-A complex member 2 Chains: C, H
Molecule details ›
Chains: C, H
Length: 387 amino acids
Theoretical weight: 43.92 KDa
Source organism: Mus musculus
Expression system: Trichoplusia ni
UniProt:
  • Canonical: Q8K3W0 (Residues: 1-383; Coverage: 100%)
Gene names: Babam2, Bre
Sequence domains: Brain and reproductive organ-expressed protein (BRE)
BRISC and BRCA1-A complex member 1 Chains: D, I
Molecule details ›
Chains: D, I
Length: 337 amino acids
Theoretical weight: 37.16 KDa
Source organism: Mus musculus
Expression system: Trichoplusia ni
UniProt:
  • Canonical: Q3UI43 (Residues: 1-333; Coverage: 100%)
Gene names: Babam1, Merit40, Nba1
BRCA1-A complex subunit RAP80 Chains: E, J
Molecule details ›
Chains: E, J
Length: 64 amino acids
Theoretical weight: 7.33 KDa
Source organism: Mus musculus
Expression system: Trichoplusia ni
UniProt:
  • Canonical: Q5U5Q9 (Residues: 275-334; Coverage: 8%)
Gene names: Rap80, Rip110, Rxrip110, Uimc1

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SLS BEAMLINE X06SA
Spacegroup: P212121
Unit cell:
a: 97.096Å b: 122.645Å c: 431.325Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.229 0.227 0.259
Expression system: Trichoplusia ni