› 6hxx

Electron Microscopy
3.4Å resolution

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
Sequence domain:

Structure analysis Details

Assembly composition:
hetero 70-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-100826 (preferred)
Entry contents:
1 distinct polypeptide molecule
1 distinct RNA molecule
Macromolecules (2 distinct):
Coat protein Chains: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV, AW, AX, AY, AZ, BA, BB, BC, BD, BE, BF, BG, BH, BI
Molecule details ›
Chains: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV, AW, AX, AY, AZ, BA, BB, BC, BD, BE, BF, BG, BH, BI
Length: 267 amino acids
Theoretical weight: 29.94 KDa
Source organism: Potato virus Y
UniProt:
  • Canonical: A0A0A7DJ81 (Residues: 1-267; Coverage: 100%)
Sequence domains: Potyvirus coat protein
RNA (5'-R(P*UP*UP*UP*UP*U)-3') Chains: Aa, Ab, Ac, Ad, Ae, Af, Ag, Ah, Ai, Aj, Ak, Al, Am, An, Ao, Ap, Aq, Ar, As, At, Au, Av, Aw, Ax, Ay, Az, Ba, Bb, Bc, Bd, Be, Bf, Bg, Bh, Bi
Molecule details ›
Chains: Aa, Ab, Ac, Ad, Ae, Af, Ag, Ah, Ai, Aj, Ak, Al, Am, An, Ao, Ap, Aq, Ar, As, At, Au, Av, Aw, Ax, Ay, Az, Ba, Bb, Bc, Bd, Be, Bf, Bg, Bh, Bi
Length: 5 nucleotides
Theoretical weight: 1.49 KDa
Source organism: Potato virus Y

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.4Å
Relevant EMDB volumes: EMD-0297

Quick links

Citations

8 review citations

The Potyviruses: An Evolutionary Synthesis Is Emerging.
Gibbs et al. (2020)
7 more

2 mentions without citation

From structural polymorphism to structural metamorphosis of the coat protein of flexuous filamentous potato virus Y.
Kavčič et al. (2024)
1 more