› 6je0

X-ray diffraction
1.43Å resolution

Ligand complex structure of GH10 family xylanase XynAF1, soaking for 30 minutes

Released:
DOI: 10.2210/pdb6je0/pdb
PDB entry 6je0 coloured by chain, front view.
PDB entry 6je0 coloured by chain, side view.
PDB entry 6je0 coloured by chain, top view.
Source organism: Aspergillus fumigatus Z5
Entry authors: Li G, Miao Y, Zhang R

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-241476 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (2 distinct):
Beta-xylanase Chains: A, B
Molecule details ›
Chains: A, B
Length: 319 amino acids
Theoretical weight: 34.35 KDa
Source organism: Aspergillus fumigatus Z5
Expression system: Komagataella pastoris

Ligands and Environments

Carbohydrate polymer : NEW Components: XYP
Carbohydrate polymer
4 bound ligands:
Ligand NAG 2 x NAG
Ligand GOL 2 x GOL
Ligand MES 1 x MES
Ligand PEG 3 x PEG
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL19U1
Spacegroup: P1
Unit cell:
a: 44.426Å b: 57.357Å c: 64.91Å
α: 73.97° β: 80.8° γ: 68.77°
R-values:
R R work R free
0.141 0.139 0.17
Expression system: Komagataella pastoris

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