› 6myc

X-ray diffraction
2.4Å resolution

Room-temperature structure of deuterated Tetdron (isomorph 2)

Released:
DOI: 10.2210/pdb6myc/pdb
PDB entry 6myc coloured by chain, front view.
PDB entry 6myc coloured by chain, side view.
PDB entry 6myc coloured by chain, top view.
Source organism: Echinophyllia sp. SC22
Entry authors: Dajnowicz S, Kovalevsky A

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-178339 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Fluorescent protein Dronpa Chains: A, B, C, D, E, F, G, H
Molecule details ›
Chains: A, B, C, D, E, F, G, H
Length: 223 amino acids
Theoretical weight: 25.46 KDa
Source organism: Echinophyllia sp. SC22
Expression system: Escherichia coli
UniProt:
  • Canonical: Q5TLG6 (Residues: 1-224; Coverage: 100%)
Gene name: Dronpa
Sequence domains: Green fluorescent protein

Ligands and Environments

No bound ligands
1 modified residue:
Ligand GYC 8 x GYC

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU MICROMAX-007
Spacegroup: P21
Unit cell:
a: 72.988Å b: 138.075Å c: 115.804Å
α: 90° β: 104.49° γ: 90°
R-values:
R R work R free
0.156 0.153 0.211
Expression system: Escherichia coli

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