› 6nkg

X-ray diffraction
2.15Å resolution

Crystal Structure of the Lipase Lip_vut5 from Goat Rumen metagenome.

Released:
DOI: 10.2210/pdb6nkg/pdb
PDB entry 6nkg coloured by chain, front view.
PDB entry 6nkg coloured by chain, side view.
PDB entry 6nkg coloured by chain, top view.
Source organism: metagenome
Entry authors: Kim Y, Welk L, Mukendi G, Nkhi G, Motloi T, Jedrzejczak R, Feto N, Joachimiak A

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-179202 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Serine aminopeptidase S33 domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 254 amino acids
Theoretical weight: 29.74 KDa
Source organism: metagenome
Expression system: Escherichia coli
UniProt:
  • Canonical: Q65EQ1 (Residues: 1-248; Coverage: 100%)
Gene names: BL03481, yvaK
Sequence domains: Serine aminopeptidase, S33

Ligands and Environments

2 bound ligands:
Ligand EDO 2 x EDO
Ligand ACY 1 x ACY
1 modified residue:
Ligand MSE 10 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P41212
Unit cell:
a: 60.11Å b: 60.11Å c: 169.898Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.197 0.195 0.235
Expression system: Escherichia coli

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