› 6ofj

Electron Microscopy
4.5Å resolution

Cryo-EM structure of the native rhodopsin dimer from rod photoreceptor cells

Released:
DOI: 10.2210/pdb6ofj/pdb
PDB entry 6ofj coloured by chain, front view.
PDB entry 6ofj coloured by chain, side view.
PDB entry 6ofj coloured by chain, top view.
Source organism: Bos taurus
Primary publication:
Cryo-EM structure of the native rhodopsin dimer in nanodiscs.
Zhao DY, Pöge M, Morizumi T, Gulati S, Van Eps N, Zhang J, Miszta P, Filipek S, Mahamid J, Plitzko JM, Baumeister W, Ernst OP, Palczewski K
J Biol Chem 294 14215-14230 (2019)
PMID: 31399513
Related structures: EMD-20047

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-136077 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Rhodopsin Chains: A, B
Molecule details ›
Chains: A, B
Length: 348 amino acids
Theoretical weight: 39.03 KDa
Source organism: Bos taurus
UniProt:
  • Canonical: P02699 (Residues: 1-348; Coverage: 100%)
Gene name: RHO
Sequence domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 4.5Å
Relevant EMDB volumes: EMD-20047

Quick links

Citations

9 review citations

Lipid nanoparticle technologies for the study of G protein-coupled receptors in lipid environments.
Lavington et al. (2020)
8 more

7 mentions without citation

Supramolecular organization of rhodopsin in rod photoreceptor cell membranes.
Park PS. (2021)
6 more