6rlb

Electron Microscopy
4.5Å resolution

Structure of the dynein-2 complex; tail domain

Released:
Source organism: Homo sapiens
Related structures: EMD-4918

Function and Biology Details

Reaction catalysed:
DNA (containing 4-O-methylthymine) + protein L-cysteine = DNA (without 4-O-methylthymine) + protein S-methyl-L-cysteine
Biochemical function:
Cellular component:

Structure analysis Details

Assembly composition:
hetero tetradecamer (preferred)
PDBe Complex ID:
PDB-CPX-109150 (preferred)
Entry contents:
6 distinct polypeptide molecules
Macromolecules (6 distinct):
Cytoplasmic dynein 2 intermediate chain 1 Chain: C
Molecule details ›
Chain: C
Length: 1066 amino acids
Theoretical weight: 122.87 KDa
Source organism: Homo sapiens
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q8WVS4 (Residues: 1-1066; Coverage: 100%)
Gene names: DYNC2I1, WDR60
Cytoplasmic dynein 2 intermediate chain 2 Chain: D
Molecule details ›
Chain: D
Length: 564 amino acids
Theoretical weight: 60.77 KDa
Source organism: Homo sapiens
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q96EX3 (Residues: 1-536; Coverage: 100%)
Gene names: DYNC2I2, WDR34
Sequence domains: WD domain, G-beta repeat
Cytoplasmic dynein 2 light intermediate chain 1 Chains: E, F
Molecule details ›
Chains: E, F
Length: 351 amino acids
Theoretical weight: 39.68 KDa
Source organism: Homo sapiens
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q8TCX1 (Residues: 1-351; Coverage: 100%)
Gene names: CGI-60, D2LIC, DYNC2LI1, LIC3
Sequence domains: Dynein light intermediate chain (DLIC)
Dynein light chain roadblock-type 1 Chains: G, H
Molecule details ›
Chains: G, H
Length: 96 amino acids
Theoretical weight: 10.93 KDa
Source organism: Homo sapiens
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q9NP97 (Residues: 1-96; Coverage: 100%)
Gene names: BITH, DNCL2A, DNLC2A, DYNLRB1, HSPC162, ROBLD1
Sequence domains: Roadblock/LC7 domain
Dynein light chain 1, cytoplasmic Chains: I, J, K, L, M, N
Molecule details ›
Chains: I, J, K, L, M, N
Length: 89 amino acids
Theoretical weight: 10.38 KDa
Source organism: Homo sapiens
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: P63167 (Residues: 1-89; Coverage: 100%)
Gene names: DLC1, DNCL1, DNCLC1, DYNLL1, HDLC1
Sequence domains: Dynein light chain type 1

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 4.5Å
Relevant EMDB volumes: EMD-4918
Expression system: Spodoptera frugiperda