› 6w90

X-ray diffraction
1.5Å resolution

De novo designed NTF2 fold protein NT-9

Released:
DOI: 10.2210/pdb6w90/pdb
PDB entry 6w90 coloured by chain, front view.
PDB entry 6w90 coloured by chain, side view.
PDB entry 6w90 coloured by chain, top view.
Source organism: synthetic construct
Primary publication:
Expanding the space of protein geometries by computational design of de novo fold families.
Pan X, Thompson MC, Zhang Y, Liu L, Fraser JS, Kelly MJS, Kortemme T
Science 369 1132-1136 (2020)
PMID: 32855341

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-167691 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
NTF2 fold protein loop-helix-loop design NT-9 Chain: A
Molecule details ›
Chain: A
Length: 131 amino acids
Theoretical weight: 15.78 KDa
Source organism: synthetic construct
Expression system: Escherichia coli

Ligands and Environments

1 bound ligand:
Ligand 3PE 1 x 3PE
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 8.3.1
Spacegroup: P212121
Unit cell:
a: 33.5Å b: 51.99Å c: 66.41Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.188 0.186 0.21
Expression system: Escherichia coli

Quick links

Citations

4 review citations

Recent advances in de novo protein design: Principles, methods, and applications.
Pan et al. (2021)
3 more

1 mention without citation

Expanding the space of protein geometries by computational design of de novo fold families.
Pan et al. (2020)