› 6yc5

X-ray diffraction
1.35Å resolution

RT structure of Thaumatin obtained at 1.35 A resolution from crystal grown in a Kapton microchip.

Released:
DOI: 10.2210/pdb6yc5/pdb
PDB entry 6yc5 coloured by chain, front view.
PDB entry 6yc5 coloured by chain, side view.
PDB entry 6yc5 coloured by chain, top view.
Source organism: Thaumatococcus daniellii
Primary publication:
Attaining atomic resolution from in situ data collection at room temperature using counter-diffusion-based low-cost microchips.
Gavira JA, Rodriguez-Ruiz I, Martinez-Rodriguez S, Basu S, Teychené S, McCarthy AA, Mueller-Dieckman C
Acta Crystallogr D Struct Biol 76 751-758 (2020)
PMID: 32744257

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-136331 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Thaumatin I Chain: A
Molecule details ›
Chain: A
Length: 207 amino acids
Theoretical weight: 22.23 KDa
Source organism: Thaumatococcus daniellii
UniProt:
  • Canonical: P02883 (Residues: 23-229; Coverage: 97%)
Sequence domains: Thaumatin family

Ligands and Environments

2 bound ligands:
Ligand TLA 1 x TLA
Ligand NA 1 x NA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID30B
Spacegroup: P41212
Unit cell:
a: 58.39Å b: 58.39Å c: 151.447Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.128 0.127 0.148

Quick links

Citations

4 citation in other articles

Plug-and-play polymer microfluidic chips for hydrated, room temperature, fixed-target serial crystallography.
Gilbile et al. (2021)
3 more