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X-ray diffraction
1Å resolution

REFINEMENT OF RUBREDOXIN FROM DESULFOVIBRIO VULGARIS AT 1.0 ANGSTROMS WITH AND WITHOUT RESTRAINTS

Released:
DOI: 10.2210/pdb8rxn/pdb
PDB entry 8rxn coloured by chain, front view.
PDB entry 8rxn coloured by chain, side view.
PDB entry 8rxn coloured by chain, top view.
Source organism: Desulfovibrio vulgaris
Primary publication:
Refinement of rubredoxin from Desulfovibrio vulgaris at 1.0 A with and without restraints.
Dauter Z, Sieker LC, Wilson KS
Acta Crystallogr B 48 ( Pt 1) 42-59 (1992)
PMID: 1616692

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-132362 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Rubredoxin Chain: A
Molecule details ›
Chain: A
Length: 52 amino acids
Theoretical weight: 5.58 KDa
Source organism: Desulfovibrio vulgaris
Expression system: Not provided
UniProt:
  • Canonical: P00269 (Residues: 1-52; Coverage: 100%)
Gene names: DVU_3184, rub
Sequence domains: Rubredoxin
Structure domains: Rubrerythrin, domain 2

Ligands and Environments

2 bound ligands:
Ligand FE 1 x FE
Ligand SO4 1 x SO4
No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: P21
Unit cell:
a: 19.97Å b: 41.45Å c: 24.41Å
α: 90° β: 108.3° γ: 90°
R-values:
R R work R free
0.147 not available not available
Expression system: Not provided

Quick links

Citations

2 review citations

Messages from ultrahigh resolution crystal structures.
Longhi et al. (1998)
1 more

10 mentions without citation

Catalysis and Electron Transfer in De Novo Designed Metalloproteins.
Koebke et al. (2022)
9 more