EMD-5119
Clathrin D6 coat
EMD-5119
Single-particle7.9 Å
Deposition: 08/06/2009
Map released: 30/09/2009
Last modified: 05/05/2010
Microscope: FEI TECNAI F20
Illumination mode: FLOOD BEAM
Imaging mode: BRIGHT FIELD
Electron source: FIELD EMISSION GUN
Acceleration voltage: 200 kV
Nominal CS: 2 mm
Nominal defocus: 2.0 µm - 5.0 µm
Nominal magnification: 50000.0
Calibrated magnification: 51159.0
Specimen holder model: GATAN LIQUID NITROGEN
Specimen holder details: Side entry liquid nitrogen-cooled cryo specimen holder
Illumination mode: FLOOD BEAM
Imaging mode: BRIGHT FIELD
Electron source: FIELD EMISSION GUN
Acceleration voltage: 200 kV
Nominal CS: 2 mm
Nominal defocus: 2.0 µm - 5.0 µm
Nominal magnification: 50000.0
Calibrated magnification: 51159.0
Specimen holder model: GATAN LIQUID NITROGEN
Specimen holder details: Side entry liquid nitrogen-cooled cryo specimen holder
Temperature
Average: 93
K
Image Recording
[1]
Detector category:
FILM
Detector model: KODAK SO-163 FILM
Scanner: ZEISS SCAI
Sampling interval: 7 µm
Number of real images: 225
Old range: 1.4
Bits per pixel: 8.0
Detector model: KODAK SO-163 FILM
Scanner: ZEISS SCAI
Sampling interval: 7 µm
Number of real images: 225
Old range: 1.4
Bits per pixel: 8.0
Final
reconstruction
Resolution: 7.9
Å
(
BY AUTHOR)
Resolution method: FSC 0.143 CUT-OFF
Number of images used: 1450
Algorithm: OTHER
Resolution method: FSC 0.143 CUT-OFF
Number of images used: 1450
Algorithm: OTHER
⌯ Applied Symmetry
Point group:
D6
Software
[1]
Name | Version | Details |
---|---|---|
Frealign | - | - |
CTF correction
Details:CTF correction of each particle.
Format: CCP4
Data type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
Annotation details: This is an averaged map of clathrin D6 coat
Details: ::::EMDATABANK.org::::EMD-5119::::
Data type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
Annotation details: This is an averaged map of clathrin D6 coat
Details: ::::EMDATABANK.org::::EMD-5119::::
⬡ Geometry
X | Y | Z | |
---|---|---|---|
Dimensions | 312 | 312 | 312 |
Origin | -156 | -156 | -156 |
Spacing | 312 | 312 | 312 |
Voxel size | 2.8 Å | 2.8 Å | 2.8 Å |
Contour list
Primary | Level | Source |
---|---|---|
True | 0.25 | EMDB |