› 1a6b

Solution NMR

NMR STRUCTURE OF THE COMPLEX BETWEEN THE ZINC FINGER PROTEIN NCP10 OF MOLONEY MURINE LEUKEMIA VIRUS AND A SEQUENCE OF THE PSI-PACKAGING DOMAIN OF HIV-1, 20 STRUCTURES

Released:
DOI: 10.2210/pdb1a6b/pdb
PDB entry 1a6b coloured by chain, ensemble of 20 models, front view.
PDB entry 1a6b coloured by chain, ensemble of 20 models, side view.
PDB entry 1a6b coloured by chain, ensemble of 20 models, top view.
Source organism: Moloney murine leukemia virus isolate Shinnick
Primary publication:
NMR structure of the complex between the zinc finger protein NCp10 of Moloney murine leukemia virus and the single-stranded pentanucleotide d(ACGCC): comparison with HIV-NCp7 complexes.
Schüler W, Dong C, Wecker K, Roques BP
Biochemistry 38 12984-94 (1999)
PMID: 10529168

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-113394 (preferred)
Entry contents:
1 distinct polypeptide molecule
1 distinct DNA molecule
Macromolecules (2 distinct):
Nucleocapsid protein p10-Gag Chain: B
Molecule details ›
Chain: B
Length: 40 amino acids
Theoretical weight: 4.71 KDa
Source organism: Moloney murine leukemia virus isolate Shinnick
Expression system: Not provided
UniProt:
  • Canonical: P03332 (Residues: 492-531; Coverage: 7%)
Gene name: gag
Sequence domains: Zinc knuckle
Structure domains: Zinc finger, CCHC-type
DNA (5'-D(*AP*CP*GP*CP*C)-3') Chain: A
Molecule details ›
Chain: A
Length: 5 nucleotides
Theoretical weight: 1.47 KDa
Source organism: Moloney murine leukemia virus isolate Shinnick
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand ZN 1 x ZN
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: DYNAMICAL SIMULATED ANNEALING, ENERGY MINIMIZATION
Expression system: Not provided

Quick links

Citations

2 review citations

Sequence-specific binding of single-stranded RNA: is there a code for recognition?
Auweter et al. (2006)
1 more

5 mentions without citation

Overview of protein structural and functional folds.
Sun et al. (2004)
4 more