› 1axj

Solution NMR

FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F), NMR, 20 STRUCTURES

Released:
DOI: 10.2210/pdb1axj/pdb
PDB entry 1axj coloured by chain, ensemble of 20 models, front view.
PDB entry 1axj coloured by chain, ensemble of 20 models, side view.
PDB entry 1axj coloured by chain, ensemble of 20 models, top view.
Source organism: Desulfovibrio vulgaris str. 'Miyazaki F'
Primary publication:
Pathway of chymotrypsin evolution suggested by the structure of the FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
Liepinsh E, Kitamura M, Murakami T, Nakaya T, Otting G
Nat Struct Biol 4 975-9 (1997)
PMID: 9406543

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-175128 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
FMN-binding protein Chain: A
Molecule details ›
Chain: A
Length: 122 amino acids
Theoretical weight: 13.15 KDa
Source organism: Desulfovibrio vulgaris str. 'Miyazaki F'
Expression system: Escherichia coli
UniProt:
  • Canonical: Q46604 (Residues: 1-122; Coverage: 100%)
Gene name: DvMF_2023
Sequence domains: Pyridoxamine 5'-phosphate oxidase
Structure domains: Electron Transport, Fmn-binding Protein; Chain A

Ligands and Environments

1 bound ligand:
Ligand FMN 1 x FMN
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: distance geometry
Expression system: Escherichia coli

Quick links

Citations

8 review citations

Principles of lysosomal membrane digestion: stimulation of sphingolipid degradation by sphingolipid activator proteins and anionic lysosomal lipids.
Kolter et al. (2005)
7 more

6 mentions without citation

The crystal structure of CREG, a secreted glycoprotein involved in cellular growth and differentiation.
Sacher et al. (2005)
5 more