› 1bj6

Solution NMR

1H NMR OF (12-53) NCP7/D(ACGCC) COMPLEX, 10 STRUCTURES

Released:
DOI: 10.2210/pdb1bj6/pdb
PDB entry 1bj6 coloured by chain, ensemble of 10 models, front view.
PDB entry 1bj6 coloured by chain, ensemble of 10 models, side view.
PDB entry 1bj6 coloured by chain, ensemble of 10 models, top view.
Source organism: Human immunodeficiency virus 1
Primary publication:
Structure of the complex between the HIV-1 nucleocapsid protein NCp7 and the single-stranded pentanucleotide d(ACGCC).
Morellet N, Déméné H, Teilleux V, Huynh-Dinh T, de Rocquigny H, Fournié-Zaluski MC, Roques BP
J Mol Biol 283 419-34 (1998)
PMID: 9769215

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-113491 (preferred)
Entry contents:
1 distinct polypeptide molecule
1 distinct DNA molecule
Macromolecules (2 distinct):
Gag Chain: A
Molecule details ›
Chain: A
Length: 42 amino acids
Theoretical weight: 4.84 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Not provided
UniProt:
  • Canonical: Q74084 (Residues: 390-430; Coverage: 8%)
Gene name: gag
Sequence domains: Zinc knuckle
Structure domains: Zinc finger, CCHC-type
DNA (5'-D(*AP*CP*GP*CP*C)-3') Chain: D
Molecule details ›
Chain: D
Length: 5 nucleotides
Theoretical weight: 1.47 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand ZN 2 x ZN
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: DYNAMICAL SIMULATED ANNEALING
Expression system: Not provided

Quick links

Citations

11 review citations

Structural determinants and mechanism of HIV-1 genome packaging.
Lu et al. (2011)
10 more

6 mentions without citation

HIV-1 assembly, release and maturation.
Freed EO. (2015)
5 more