› 1bp8

Solution NMR

4:2:1 mithramycin:Mg++:d(ACCCGGGT)2 complex

Released:
DOI: 10.2210/pdb1bp8/pdb
PDB entry 1bp8 coloured by chain, front view.
PDB entry 1bp8 coloured by chain, side view.
PDB entry 1bp8 coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
The three-dimensional structure of the 4:1 mithramycin:d(ACCCGGGT)(2) complex: evidence for an interaction between the E saccharides.
Keniry MA, Owen EA, Shafer RH
Biopolymers 54 104-14 (2000)
PMID: 10861371

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-113500 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecules (3 distinct):
5'-D(*AP*CP*CP*CP*GP*GP*GP*T)-3' Chains: A, B
Molecule details ›
Chains: A, B
Length: 8 nucleotides
Theoretical weight: 2.43 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

Carbohydrate polymer : NEW Components: DDA
Carbohydrate polymer
Carbohydrate polymer : NEW Components: DDA, DDL, MDA
Carbohydrate polymer
2 bound ligands:
Ligand MG 2 x MG
Ligand DXB 4 x DXB
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this NMR entry.
Refinement method: FULL RELAXATION MATRIX ANALYSIS AND RESTRAINED MOLECULAR DYNAMICS
Expression system: Not provided

Quick links

Citations

2 review citations

Type II polyketide synthases: gaining a deeper insight into enzymatic teamwork.
Hertweck et al. (2007)
1 more

1 mention without citation

Trendspotting in the Protein Data Bank.
Berman et al. (2013)