› 1c95

Solution NMR

Solution structure of the aminoacyl-capped oligodeoxyribonucleotide duplex TRP-D(TGCGCAC)2

Released:
DOI: 10.2210/pdb1c95/pdb
PDB entry 1c95 coloured by chain, front view.
PDB entry 1c95 coloured by chain, side view.
PDB entry 1c95 coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
Solution structure of the aminoacyl-capped oligodeoxyribonucleotide duplex (W-TGCGCAC)(2).
Ho WC, Steinbeck C, Richert C
Biochemistry 38 12597-606 (1999)
PMID: 10504228

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-113531 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
5'-D((5AT)TP*GP*CP*GP*CP*AP*C)-3' Chains: A, B
Molecule details ›
Chains: A, B
Length: 7 nucleotides
Theoretical weight: 2.02 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand TRP 2 x TRP
1 modified residue:
Ligand 5AT 2 x 5AT

Experiments and Validation Details

Entry percentile scores
Refinement method: TORSION-ANGLE MOLECULAR DYNAMICS FOLLOWED BY CARTESIAN MOLECULAR DYNAMICS
Expression system: Not provided

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Citations

7 citation in other articles

Molecular details of quinolone-DNA interactions: solution structure of an unusually stable DNA duplex with covalently linked nalidixic acid residues and non-covalent complexes derived from it.
Siegmund et al. (2005)
6 more