› 1d1d

Solution NMR

NMR SOLUTION STRUCTURE OF THE CAPSID PROTEIN FROM ROUS SARCOMA VIRUS

Released:
DOI: 10.2210/pdb1d1d/pdb
PDB entry 1d1d coloured by chain, ensemble of 20 models, front view.
PDB entry 1d1d coloured by chain, ensemble of 20 models, side view.
PDB entry 1d1d coloured by chain, ensemble of 20 models, top view.
Source organism: Rous sarcoma virus
Primary publication:
Solution structure and dynamics of the Rous sarcoma virus capsid protein and comparison with capsid proteins of other retroviruses.
Campos-Olivas R, Newman JL, Summers MF
J Mol Biol 296 633-49 (2000)
PMID: 10669613

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
  • not assigned
Sequence domains:
Structure domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-131653 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Capsid protein p27, alternate cleaved 2 Chain: A
Molecule details ›
Chain: A
Length: 262 amino acids
Theoretical weight: 28.44 KDa
Source organism: Rous sarcoma virus
Expression system: Escherichia coli
UniProt:
  • Canonical: O92954 (Residues: 239-479; Coverage: 34%)
Gene name: gag
Sequence domains: gag protein p24 N-terminal domain
Structure domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: TORSION ANGLE DYNAMICS SIMULATED ANNEALING
Expression system: Escherichia coli

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Citations

5 review citations

The structural biology of HIV assembly.
Ganser-Pornillos et al. (2008)
4 more

8 mentions without citation

Probability-based protein secondary structure identification using combined NMR chemical-shift data.
Wang et al. (2002)
7 more