› 1d20

Solution NMR

SOLUTION STRUCTURE OF PHAGE LAMBDA HALF-OPERATOR DNA

Released:
DOI: 10.2210/pdb1d20/pdb
PDB entry 1d20 coloured by chain, front view.
PDB entry 1d20 coloured by chain, side view.
PDB entry 1d20 coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
Solution structure of phage lambda half-operator DNA by use of NMR, restrained molecular dynamics, and NOE-based refinement.
Baleja JD, Pon RT, Sykes BD
Biochemistry 29 4828-39 (1990)
PMID: 2141998

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-113581 (preferred)
Entry contents:
2 distinct DNA molecules
Macromolecules (2 distinct):
DNA (5'-D(*TP*CP*TP*AP*TP*CP*AP*CP*CP*G)-3') Chain: A
Molecule details ›
Chain: A
Length: 10 nucleotides
Theoretical weight: 2.98 KDa
Source organism: Synthetic construct
Expression system: Not provided
DNA (5'-D(*CP*GP*GP*TP*GP*AP*TP*AP*GP*A)-3') Chain: B
Molecule details ›
Chain: B
Length: 10 nucleotides
Theoretical weight: 3.11 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: ENERGY MINIMIZATION, MOLECULAR DYNAMICS
Expression system: Not provided

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Citations

1 review citation

Derivation of locally accurate spatial protein structure from NMR data.
Sherman et al. (1993)
30 other articles

1 mention without citation

AMOEBA Polarizable Atomic Multipole Force Field for Nucleic Acids.
Zhang et al. (2018)