› 1d58

X-ray diffraction
1.7Å resolution

THE MOLECULAR STRUCTURE OF A 4'-EPIADRIAMYCIN COMPLEX WITH D(TGATCA) AT 1.7 ANGSTROM RESOLUTION-COMPARISON WITH THE STRUCTURE OF 4'-EPIADRIAMYCIN D(TGTACA) AND D(CGATCG) COMPLEXES

Released:
DOI: 10.2210/pdb1d58/pdb
PDB entry 1d58 coloured by chain, front view.
PDB entry 1d58 coloured by chain, side view.
PDB entry 1d58 coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
The molecular structure of a 4'-epiadriamycin complex with d(TGATCA) at 1.7A resolution: comparison with the structure of 4'-epiadriamycin d(TGTACA) and d(CGATCG) complexes.
Langlois d'Estaintot B, Gallois B, Brown T, Hunter WN
Nucleic Acids Res 20 3561-6 (1992)
PMID: 1641324

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-113617 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
DNA (5'-D(*TP*GP*AP*TP*CP*A)-3') Chain: A
Molecule details ›
Chain: A
Length: 6 nucleotides
Theoretical weight: 1.81 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand DM6 1 x DM6
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU RU200
Spacegroup: P41212
Unit cell:
a: 28.014Å b: 28.014Å c: 52.947Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.202 0.202 not available
Expression system: Not provided

Quick links

Citations

1 review citation

Structure and function of "metalloantibiotics".
Ming LJ. (2003)
8 other articles

2 mentions without citation

DNA conformations and their sequence preferences.
Svozil et al. (2008)
1 more