› 1d67

X-ray diffraction
1.6Å resolution

THE MOLECULAR STRUCTURE OF AN IDARUBICIN-D(TGATCA) COMPLEX AT HIGH RESOLUTION

Released:
DOI: 10.2210/pdb1d67/pdb
PDB entry 1d67 coloured by chain, front view.
PDB entry 1d67 coloured by chain, side view.
PDB entry 1d67 coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
The structure of an idarubicin-d(TGATCA) complex at high resolution.
Gallois B, d'Estaintot BL, Brown T, Hunter WN
Acta Crystallogr D Biol Crystallogr 49 311-7 (1993)
PMID: 15299520

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-113627 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
DNA (5'-D(*TP*GP*AP*TP*CP*A)-3') Chain: A
Molecule details ›
Chain: A
Length: 6 nucleotides
Theoretical weight: 1.81 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand DM5 1 x DM5
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU RU200
Spacegroup: P41212
Unit cell:
a: 28.19Å b: 28.19Å c: 52.77Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.222 not available not available
Expression system: Not provided

Quick links

Citations

1 citations in other articles

A trigonal form of the idarubicin:d(CGATCG) complex; crystal and molecular structure at 2.0 A resolution.
Dautant et al. (1995)

4 mentions without citation

DNA conformations and their sequence preferences.
Svozil et al. (2008)
3 more