› 1d83

Solution NMR

STRUCTURE REFINEMENT OF THE CHROMOMYCIN DIMER/DNA OLIGOMER COMPLEX IN SOLUTION

Released:
DOI: 10.2210/pdb1d83/pdb
PDB entry 1d83 coloured by chain, front view.
PDB entry 1d83 coloured by chain, side view.
PDB entry 1d83 coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
Structure refinement of the chromomycin dimer-DNA oligomer complex in solution.
Gao XL, Mirau P, Patel DJ
J Mol Biol 223 259-79 (1992)
PMID: 1731073

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-113641 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecules (3 distinct):
DNA (5'-D(*AP*AP*GP*GP*CP*CP*TP*T)-3') Chains: A, B
Molecule details ›
Chains: A, B
Length: 8 nucleotides
Theoretical weight: 2.43 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

Carbohydrate polymer : NEW Components: CDR, ERI
Carbohydrate polymer
Carbohydrate polymer : NEW Components: ARI, 1GL
Carbohydrate polymer
2 bound ligands:
Ligand CPH 2 x CPH
Ligand MG 1 x MG
No modified residues

Experiments and Validation Details

Entry percentile scores
Expression system: Not provided

Quick links

Citations

4 review citations

Targeting the minor groove of DNA.
Wemmer et al. (1997)
3 more

2 mentions without citation

Structure determination by restrained molecular dynamics using NMR pseudocontact shifts as experimentally determined constraints.
Tu et al. (1999)
1 more