› 1d88

X-ray diffraction
2Å resolution

CONFORMATIONAL INFLUENCE OF THE RIBOSE 2'-HYDROXYL GROUP: CRYSTAL STRUCTURES OF DNA-RNA CHIMERIC DUPLEXES

Released:
DOI: 10.2210/pdb1d88/pdb
Model geometry
Fit model/data
Data not deposited
PDB entry 1d88 coloured by chain, front view.
PDB entry 1d88 coloured by chain, side view.
PDB entry 1d88 coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
Conformational influence of the ribose 2'-hydroxyl group: crystal structures of DNA-RNA chimeric duplexes.
Egli M, Usman N, Rich A
Biochemistry 32 3221-37 (1993)
PMID: 7681688

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-113054 (preferred)
Entry contents:
1 distinct DNA/RNA hybrid molecule
Macromolecule:
DNA/RNA (5'-D(*GP*CP*GP*TP*)-R(*AP*)-D(*TP*AP*CP*GP*C)-3') Chains: A, B
Molecule details ›
Chains: A, B
Length: 10 nucleotides
Theoretical weight: 3.06 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
Spacegroup: P212121
Unit cell:
a: 25.25Å b: 45.73Å c: 45.83Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.195 not available not available
Expression system: Not provided

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Citations

19 review citations

Unlocking the sugar "steric gate" of DNA polymerases.
Brown et al. (2011)
18 more