› 1eek

Solution NMR

SOLUTION STRUCTURE OF A NONPOLAR, NON HYDROGEN BONDED BASE PAIR SURROGATE IN DNA.

Released:
DOI: 10.2210/pdb1eek/pdb
PDB entry 1eek coloured by chain, front view.
PDB entry 1eek coloured by chain, side view.
PDB entry 1eek coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
Solution Structure of a Nonpolar, Non-Hydrogen-Bonded Base Pair Surrogate in DNA.
Guckian KM, Krugh TR, Kool ET
J Am Chem Soc 122 6841-6847 (2000)
PMID: 20882115

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-113730 (preferred)
Entry contents:
2 distinct DNA molecules
Macromolecules (2 distinct):
5'-D(*CP*GP*CP*AP*TP*(DFT)P*GP*TP*TP*AP*CP*C)-3' Chain: 1
Molecule details ›
Chain: 1
Length: 12 nucleotides
Theoretical weight: 3.62 KDa
Source organism: Synthetic construct
Expression system: Not provided
5'-D(*GP*GP*TP*AP*AP*CP*(MBZ)P*AP*TP*GP*CP*G)-3' Chain: 2
Molecule details ›
Chain: 2
Length: 12 nucleotides
Theoretical weight: 3.71 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: restrained molecular dynamics
Expression system: Not provided

Quick links

Citations

9 review citations

Active site tightness and substrate fit in DNA replication.
Kool ET. (2002)
8 more

1 mention without citation

Solution Structure of a Nonpolar, Non-Hydrogen-Bonded Base Pair Surrogate in DNA.
Guckian et al. (2000)