› 1esh

Solution NMR

THE SOLUTION STRUCTURE OF THE STEM LOOP C 5'AUA3' TRILOOP OF BROME MOSAIC VIRUS (+) STRAND RNA

Released:
DOI: 10.2210/pdb1esh/pdb
PDB entry 1esh coloured by chain, front view.
PDB entry 1esh coloured by chain, side view.
PDB entry 1esh coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
RNA motifs that determine specificity between a viral replicase and its promoter.
Kim CH, Kao CC, Tinoco I
Nat Struct Biol 7 415-23 (2000)
PMID: 10802741

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196006 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
RNA (5'-R(*GP*GP*UP*GP*CP*AP*UP*AP*GP*CP*AP*CP*C)-3') Chain: A
Molecule details ›
Chain: A
Length: 13 nucleotides
Theoretical weight: 4.16 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: RMD WITH SIMULATED ANNEALING
Expression system: Not provided

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Citations

6 review citations

Role of tRNA-like structures in controlling plant virus replication.
Dreher TW. (2009)
5 more

4 mentions without citation

The subgenomic promoter of brome mosaic virus folds into a stem-loop structure capped by a pseudo-triloop that is structurally similar to the triloop of the genomic promoter.
Skov et al. (2012)
3 more