› 1f5u

Solution NMR

SOLUTION STRUCTURE OF THE KISSING DIMER OF H3 GACG STEM-LOOP IN THE 5'-END DIMERIZATION SIGNAL OF MOLONEY MURINE LEUKEMIA VIRUS GENOMIC RNA

Released:
DOI: 10.2210/pdb1f5u/pdb
PDB entry 1f5u coloured by chain, front view.
PDB entry 1f5u coloured by chain, side view.
PDB entry 1f5u coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
A retroviral RNA kissing complex containing only two G.C base pairs.
Kim CH, Tinoco I
Proc Natl Acad Sci U S A 97 9396-401 (2000)
PMID: 10931958

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196012 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
RNA (5'-R(*GP*GP*UP*GP*GP*GP*AP*GP*AP*CP*GP*UP*CP*CP*CP*AP*CP*C)-3') Chains: A, B
Molecule details ›
Chains: A, B
Length: 18 nucleotides
Theoretical weight: 5.8 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing
Expression system: Not provided

Quick links

Citations

12 review citations

How retroviruses select their genomes.
D'Souza et al. (2005)
11 more

7 mentions without citation

Structural Insights into RNA Dimerization: Motifs, Interfaces and Functions.
Bou-Nader et al. (2020)
6 more