› 1fv8

Solution NMR

NMR STUDY OF AN HETEROCHIRAL HAIRPIN

Released:
DOI: 10.2210/pdb1fv8/pdb
PDB entry 1fv8 coloured by chain, ensemble of 11 models, front view.
PDB entry 1fv8 coloured by chain, ensemble of 11 models, side view.
PDB entry 1fv8 coloured by chain, ensemble of 11 models, top view.
Source organism: Synthetic construct
Primary publication:
NMR study of a heterochiral DNA hairpin:impact of L-enantiomery in the loop.
El Amri C, Mauffret O, Santamariar F, Tevanian G, Rayner S, Fermandjian S
J Biomol Struct Dyn 19 459-70 (2001)
PMID: 11790144

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-113825 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
5'-D(*TP*AP*TP*CP*AP*(0DT)P*CP*GP*AP*TP*A)-3' Chain: A
Molecule details ›
Chain: A
Length: 11 nucleotides
Theoretical weight: 3.33 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
1 modified residue:
Ligand 0DT 1 x 0DT

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing, torsion angle dynamics
Expression system: Not provided

Quick links

Citations

2 review citations

Exploring the role of chirality in nucleic acid recognition.
D'Alonzo et al. (2011)
1 more

2 mentions without citation

Three-dimensional modeling of single stranded DNA hairpins for aptamer-based biosensors.
Jeddi et al. (2017)
1 more