› 1fwo

Solution NMR

THE SOLUTION STRUCTURE OF A 35-RESIDUE FRAGMENT FROM THE GRANULIN/EPITHELIN-LIKE SUBDOMAIN OF RICE ORYZAIN BETA (ROB 382-416 (C398S,C399S,C407S,C413S))

Released:
DOI: 10.2210/pdb1fwo/pdb
PDB entry 1fwo coloured by chain, ensemble of 10 models, front view.
PDB entry 1fwo coloured by chain, ensemble of 10 models, side view.
PDB entry 1fwo coloured by chain, ensemble of 10 models, top view.
Source organism: Oryza sativa Japonica Group
Primary publication:
A peptide derived from the C-terminal part of a plant cysteine protease folds into a stack of two beta-hairpins, a scaffold present in the emerging family of granulin-like growth factors.
Tolkatchev D, Xu P, Ni F
J Pept Res 57 227-33 (2001)
PMID: 11298924

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-150578 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Oryzain beta chain Chain: A
Molecule details ›
Chain: A
Length: 35 amino acids
Theoretical weight: 3.71 KDa
Source organism: Oryza sativa Japonica Group
Expression system: Not provided
UniProt:
  • Canonical: P25777 (Residues: 383-417; Coverage: 8%)
Gene names: H0818H01.14, LOC_Os04g57440, OSJNBa0043A12.28, Os04g0670200
Sequence domains: Granulin

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: distance geometry and simulated annealing
Expression system: Not provided

Quick links

Citations

1 review citation

The lysosomal function of progranulin, a guardian against neurodegeneration.
Paushter et al. (2018)
9 other articles

5 mentions without citation

Structure of the kainate receptor subunit GluR6 agonist-binding domain complexed with domoic acid.
Nanao et al. (2005)
4 more