› 1g2j

X-ray diffraction
1.97Å resolution

RNA OCTAMER R(CCCP*GGGG) CONTAINING PHENYL RIBONUCLEOTIDE

Released:
DOI: 10.2210/pdb1g2j/pdb
PDB entry 1g2j coloured by chain, front view.
PDB entry 1g2j coloured by chain, side view.
PDB entry 1g2j coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
Crystal structure of an RNA duplex containing phenyl-ribonucleotides, hydrophobic isosteres of the natural pyrimidines.
Minasov G, Matulic-Adamic J, Wilds CJ, Haeberli P, Usman N, Beigelman L, Egli M
RNA 6 1516-28 (2000)
PMID: 11105752

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196032 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
5'-R(*CP*CP*CP*(PYY)P*GP*GP*GP*G)-3' Chain: A
Molecule details ›
Chain: A
Length: 8 nucleotides
Theoretical weight: 2.52 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand CA 2 x CA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 5ID-B
Spacegroup: P6122
Unit cell:
a: 24.31Å b: 24.31Å c: 123.79Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.217 0.217 0.269
Expression system: Not provided

Quick links

Citations

3 review citations

The expanded genetic alphabet.
Malyshev et al. (2015)
2 more