› 1gav

X-ray diffraction
3.4Å resolution

BACTERIOPHAGE GA PROTEIN CAPSID

Released:
DOI: 10.2210/pdb1gav/pdb
PDB entry 1gav coloured by chain, front view.
PDB entry 1gav coloured by chain, side view.
PDB entry 1gav coloured by chain, top view.
Source organism: Enterobacteria phage GA
Primary publication:
The crystal structure of bacteriophage GA and a comparison of bacteriophages belonging to the major groups of Escherichia coli leviviruses.
Tars K, Bundule M, Fridborg K, Liljas L
J Mol Biol 271 759-73 (1997)
PMID: 9299325

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo 180-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-139443 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Capsid protein Chains: 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d, e, f, g, h, i
Molecule details ›
Chains: 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d, e, f, g, h, i
Length: 129 amino acids
Theoretical weight: 13.64 KDa
Source organism: Enterobacteria phage GA
UniProt:
  • Canonical: P07234 (Residues: 2-130; Coverage: 99%)
Sequence domains: Levivirus coat protein
Structure domains: MS2 Viral Coat Protein

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SRS BEAMLINE PX9.6
Spacegroup: I222
Unit cell:
a: 272.7Å b: 293.5Å c: 339.3Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.279 0.279 not available

Quick links

Citations

3 review citations

Bacteriophage assembly.
Aksyuk et al. (2011)
2 more

9 mentions without citation

Virus Isoelectric Point Estimation: Theories and Methods.
Heffron et al. (2021)
8 more